Trawler: de novo regulatory motif discovery pipeline for chromatin immunoprecipitation
We developed Trawler, the fastest computational pipeline to date, to efficiently discover over-represented motifs in chromatin immunoprecipitation (ChIP) experiments and to predict their functional instances. When we applied Trawler to data from yeast and mammals, 83% of the known binding sites were...
Gespeichert in:
| Hauptverfasser: | , , |
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| Dokumenttyp: | Article (Journal) |
| Sprache: | Englisch |
| Veröffentlicht: |
24 June 2007
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| In: |
Nature methods
Year: 2007, Jahrgang: 4, Heft: 7, Pages: 563-565 |
| ISSN: | 1548-7105 |
| DOI: | 10.1038/nmeth1061 |
| Online-Zugang: | Verlag, Volltext: http://dx.doi.org/10.1038/nmeth1061 Verlag, Volltext: https://www.nature.com/nmeth/journal/v4/n7/full/nmeth1061.html 
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| Verfasserangaben: | Laurence Ettwiller, Benedict Paten, Mirana Ramialison, Ewan Birney, Joachim Wittbrodt |
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