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Using Trawler_standalone to discover overrepresented motifs in DNA and RNA sequences derived from various experiments including chromatin immunoprecipitation

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Genome-wide location analysis has become a standard technology to unravel gene regulation networks. The accurate characterization of nucleotide signatures in sequences is key to uncovering the regulatory logic but remains a computational challenge. This protocol describes how to best characterize th...

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Hauptverfasser: Haudry, Yannick (VerfasserIn) , Ramialison, Mirana (VerfasserIn) , Wittbrodt, Joachim (VerfasserIn) , Ettwiller, Laurence (VerfasserIn)
Dokumenttyp: Article (Journal)
Sprache:Englisch
Veröffentlicht: 4 February 2010
In: Nature protocols
Year: 2010, Jahrgang: 5, Heft: 2, Pages: 323-334
ISSN:1750-2799
DOI:10.1038/nprot.2009.158
Online-Zugang:Verlag, Volltext: http://dx.doi.org/10.1038/nprot.2009.158
Verlag, Volltext: https://www.nature.com/nprot/journal/v5/n2/full/nprot.2009.158.html
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Verfasserangaben:Yannick Haudry, Mirana Ramialison, Benedict Paten, Joachim Wittbrodt, Laurence Ettwiller
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Buchumschlag

Using Trawler_standalone to discover overrepresented motifs in DNA and RNA sequences derived from various experiments including chromatin immunoprecipitation von Haudry, Yannick (VerfasserIn) , Ramialison, Mirana (VerfasserIn) , Wittbrodt, Joachim (VerfasserIn) , Ettwiller, Laurence (VerfasserIn) ,


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