Computational approaches to disease‐gene prediction: rationale, classification and successes

The identification of genes involved in human hereditary diseases often requires the time?consuming and expensive examination of a great number of possible candidate genes, since genome?wide techniques such as linkage analysis and association studies frequently select many hundreds of ?positional? c...

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Main Authors: Piro, Rosario M. (Author) , Cunto, Ferdinando di (Author)
Format: Article (Journal)
Language:English
Published: 5 January 2012
In: The FEBS journal
Year: 2012, Volume: 279, Issue: 5, Pages: 678-696
ISSN:1742-4658
DOI:10.1111/j.1742-4658.2012.08471.x
Online Access:Verlag, kostenfrei, Volltext: http://dx.doi.org/10.1111/j.1742-4658.2012.08471.x
Verlag, kostenfrei, Volltext: https://febs.onlinelibrary.wiley.com/doi/full/10.1111/j.1742-4658.2012.08471.x
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Author Notes:Rosario M. Piro and Ferdinando Di Cunto

MARC

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520 |a The identification of genes involved in human hereditary diseases often requires the time?consuming and expensive examination of a great number of possible candidate genes, since genome?wide techniques such as linkage analysis and association studies frequently select many hundreds of ?positional? candidates. Even considering the positive impact of next?generation sequencing technologies, the prioritization of candidate genes may be an important step for disease?gene identification. In this paper we develop a basic classification scheme for computational approaches to disease?gene prediction and apply it to exhaustively review bioinformatics tools that have been developed for this purpose, focusing on conceptual aspects rather than technical detail and performance. Finally, we discuss some past successes obtained by computational approaches to illustrate their beneficial contribution to medical research. 
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