Enhanced labeling density and whole-cell 3D dSTORM imaging by repetitive labeling of target proteins

With continuing advances in the resolving power of super-resolution microscopy, the inefficient labeling of proteins with suitable fluorophores becomes a limiting factor. For example, the low labeling density achieved with antibodies or small molecule tags limits attempts to reveal local protein nan...

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Hauptverfasser: Venkataramani, Varun (VerfasserIn) , Kardorff, Markus (VerfasserIn) , Herrmannsdörfer, Frank (VerfasserIn) , Heilemann, Mike (VerfasserIn) , Kuner, Thomas (VerfasserIn)
Dokumenttyp: Article (Journal)
Sprache:Englisch
Veröffentlicht: 2018
In: Scientific reports
Year: 2018, Jahrgang: 8
ISSN:2045-2322
DOI:10.1038/s41598-018-23818-0
Online-Zugang:Verlag, kostenfrei, Volltext: http://dx.doi.org/10.1038/s41598-018-23818-0
Verlag, kostenfrei, Volltext: https://www.nature.com/articles/s41598-018-23818-0
Volltext
Verfasserangaben:Varun Venkataramani, Markus Kardorff, Frank Herrmannsdörfer, Ralph Wieneke, Alina Klein, Robert Tampé, Mike Heilemann & Thomas Kuner

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520 |a With continuing advances in the resolving power of super-resolution microscopy, the inefficient labeling of proteins with suitable fluorophores becomes a limiting factor. For example, the low labeling density achieved with antibodies or small molecule tags limits attempts to reveal local protein nano-architecture of cellular compartments. On the other hand, high laser intensities cause photobleaching within and nearby an imaged region, thereby further reducing labeling density and impairing multi-plane whole-cell 3D super-resolution imaging. Here, we show that both labeling density and photobleaching can be addressed by repetitive application of trisNTA-fluorophore conjugates reversibly binding to a histidine-tagged protein by a novel approach called single-epitope repetitive imaging (SERI). For single-plane super-resolution microscopy, we demonstrate that, after multiple rounds of labeling and imaging, the signal density is increased. Using the same approach of repetitive imaging, washing and re-labeling, we demonstrate whole-cell 3D super-resolution imaging compensated for photobleaching above or below the imaging plane. This proof-of-principle study demonstrates that repetitive labeling of histidine-tagged proteins provides a versatile solution to break the ‘labeling barrier’ and to bypass photobleaching in multi-plane, whole-cell 3D experiments. 
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