NG-meta-profiler: fast processing of metagenomes using NGLess, a domain-specific language
Shotgun metagenomes contain a sample of all the genomic material in an environment, allowing for the characterization of a microbial community. In order to understand these communities, bioinformatics methods are crucial. A common first step in processing metagenomes is to compute abundance estimate...
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| Hauptverfasser: | , |
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| Dokumenttyp: | Article (Journal) |
| Sprache: | Englisch |
| Veröffentlicht: |
03 June 2019
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| In: |
Microbiome
Year: 2019, Jahrgang: 7 |
| ISSN: | 2049-2618 |
| DOI: | 10.1186/s40168-019-0684-8 |
| Online-Zugang: | Verlag, Volltext: https://doi.org/10.1186/s40168-019-0684-8 Verlag, Volltext: https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-019-0684-8 |
| Verfasserangaben: | Luis Pedro Coelho, Renato Alves, Paulo Monteiro, Jaime Huerta-Cepas, Ana Teresa Freitas and Peer Bork |
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NG-meta-profiler: fast processing of metagenomes using NGLess, a domain-specific language
BioMed Central 07 Aug. 2019 Universitätsbibliothek Heidelberg 07 Aug. 2019
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