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Obtaining miRNA-target interaction information from miRWalk2.0

miRWalk2.0 (http://zmf.umm.uni-heidelberg.de/mirwalk2) is a freely accessible, regularly updated comprehensive archive supplying the largest available collection of predicted and experimentally verified miRNA-target interactions, with various novel and unique features to assist the scientific commun...

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Hauptverfasser: Parveen, Alisha (VerfasserIn) , Gretz, Norbert (VerfasserIn) , Dweep, Harsh (VerfasserIn)
Dokumenttyp: Article (Journal)
Sprache:Englisch
Veröffentlicht: September 2016
In: Current protocols in bioinformatics
Year: 2016, Jahrgang: 55, Heft: 1, Pages: 12.15.1-12.15.27
ISSN:1934-340X
DOI:10.1002/cpbi.14
Online-Zugang:Verlag, lizenzpflichtig, Volltext: https://doi.org/10.1002/cpbi.14
Verlag, lizenzpflichtig, Volltext: https://currentprotocols.onlinelibrary.wiley.com/doi/abs/10.1002/cpbi.14
Volltext
Verfasserangaben:Alisha Parveen, Norbert Gretz, and Harsh Dweep

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520 |a miRWalk2.0 (http://zmf.umm.uni-heidelberg.de/mirwalk2) is a freely accessible, regularly updated comprehensive archive supplying the largest available collection of predicted and experimentally verified miRNA-target interactions, with various novel and unique features to assist the scientific community. Approximately 949 million interactions between 11,748 miRNAs, 308,700 genes, and 68,460 lncRNAs are documented in miRWalk2.0 with 5,146,217 different kinds of identifiers to offer a one-stop site to collect an abundance of information. This article describes a schematic workflow on how to obtain miRNA-target interactions from miRWalk2.0. © 2016 by John Wiley & Sons, Inc. 
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