CytoASP: a Cytoscape app for qualitative consistency reasoning, prediction and repair in biological networks
Qualitative reasoning frameworks, such as the Sign Consistency Model (SCM), enable modelling regulatory networks to check whether observed behaviour can be explained or if unobserved behaviour can be predicted. The BioASP software collection offers ideal tools for such analyses. Additionally, the Cy...
Saved in:
| Main Authors: | , , , , |
|---|---|
| Format: | Article (Journal) |
| Language: | English |
| Published: |
11 July 2015
|
| In: |
BMC systems biology
Year: 2015, Volume: 9, Issue: 1 |
| ISSN: | 1752-0509 |
| DOI: | 10.1186/s12918-015-0179-6 |
| Online Access: | Resolving-System, lizenzpflichtig, Volltext: https://doi.org/10.1186/s12918-015-0179-6 Verlag, lizenzpflichtig, Volltext: https://bmcsystbiol.biomedcentral.com/articles/10.1186/s12918-015-0179-6 
|
| Author Notes: | Aristotelis Kittas, Amélie Barozet, Jekaterina Sereshti, Niels Grabe and Sophia Tsoka |
MARC
| LEADER | 00000caa a2200000 c 4500 | ||
|---|---|---|---|
| 001 | 1703446127 | ||
| 003 | DE-627 | ||
| 005 | 20220818141818.0 | ||
| 007 | cr uuu---uuuuu | ||
| 008 | 200703s2015 xx |||||o 00| ||eng c | ||
| 024 | 7 | |a 10.1186/s12918-015-0179-6 |2 doi | |
| 035 | |a (DE-627)1703446127 | ||
| 035 | |a (DE-599)KXP1703446127 | ||
| 035 | |a (OCoLC)1341344404 | ||
| 040 | |a DE-627 |b ger |c DE-627 |e rda | ||
| 041 | |a eng | ||
| 084 | |a 32 |2 sdnb | ||
| 100 | 1 | |a Kittas, Aristotelis |e VerfasserIn |0 (DE-588)1101388498 |0 (DE-627)85971148X |0 (DE-576)469885718 |4 aut | |
| 245 | 1 | 0 | |a CytoASP |b a Cytoscape app for qualitative consistency reasoning, prediction and repair in biological networks |c Aristotelis Kittas, Amélie Barozet, Jekaterina Sereshti, Niels Grabe and Sophia Tsoka |
| 264 | 1 | |c 11 July 2015 | |
| 336 | |a Text |b txt |2 rdacontent | ||
| 337 | |a Computermedien |b c |2 rdamedia | ||
| 338 | |a Online-Ressource |b cr |2 rdacarrier | ||
| 500 | |a Gesehen am 03.07.2020 | ||
| 520 | |a Qualitative reasoning frameworks, such as the Sign Consistency Model (SCM), enable modelling regulatory networks to check whether observed behaviour can be explained or if unobserved behaviour can be predicted. The BioASP software collection offers ideal tools for such analyses. Additionally, the Cytoscape platform can offer extensive functionality and visualisation capabilities. However, specialist programming knowledge is required to use BioASP and no methods exist to integrate both of these software platforms effectively. | ||
| 700 | 1 | |a Barozet, Amélie |e VerfasserIn |4 aut | |
| 700 | 1 | |a Sereshti, Jekaterina |e VerfasserIn |0 (DE-588)1101388714 |0 (DE-627)859712109 |0 (DE-576)469886684 |4 aut | |
| 700 | 1 | |a Grabe, Niels |e VerfasserIn |0 (DE-588)123210615 |0 (DE-627)716920697 |0 (DE-576)364937602 |4 aut | |
| 700 | 1 | |a Tsoka, Sophia |e VerfasserIn |4 aut | |
| 773 | 0 | 8 | |i Enthalten in |t BMC systems biology |d London : BioMed Central, 2007 |g 9(2015,1) Artikel-Nummer 34, 7 Seiten |h Online-Ressource |w (DE-627)522897126 |w (DE-600)2265490-2 |w (DE-576)263254828 |x 1752-0509 |7 nnas |a CytoASP a Cytoscape app for qualitative consistency reasoning, prediction and repair in biological networks |
| 773 | 1 | 8 | |g volume:9 |g year:2015 |g number:1 |a CytoASP a Cytoscape app for qualitative consistency reasoning, prediction and repair in biological networks |
| 856 | 4 | 0 | |u https://doi.org/10.1186/s12918-015-0179-6 |x Resolving-System |x Verlag |z lizenzpflichtig |3 Volltext |
| 856 | 4 | 0 | |u https://bmcsystbiol.biomedcentral.com/articles/10.1186/s12918-015-0179-6 |x Verlag |z lizenzpflichtig |3 Volltext |
| 951 | |a AR | ||
| 992 | |a 20200703 | ||
| 993 | |a Article | ||
| 994 | |a 2015 | ||
| 998 | |g 123210615 |a Grabe, Niels |m 123210615:Grabe, Niels |d 910000 |d 910100 |e 910000PG123210615 |e 910100PG123210615 |k 0/910000/ |k 1/910000/910100/ |p 4 | ||
| 998 | |g 1101388714 |a Sereshti, Jekaterina |m 1101388714:Sereshti, Jekaterina |d 910000 |e 910000PS1101388714 |k 0/910000/ |p 3 | ||
| 999 | |a KXP-PPN1703446127 |e 3695265507 | ||
| BIB | |a Y | ||
| SER | |a journal | ||
| JSO | |a {"title":[{"subtitle":"a Cytoscape app for qualitative consistency reasoning, prediction and repair in biological networks","title_sort":"CytoASP","title":"CytoASP"}],"relHost":[{"title":[{"title_sort":"BMC systems biology","title":"BMC systems biology"}],"physDesc":[{"extent":"Online-Ressource"}],"part":{"volume":"9","issue":"1","year":"2015","text":"9(2015,1) Artikel-Nummer 34, 7 Seiten"},"language":["eng"],"pubHistory":["1.2007 - 13.2019; damit Ersch. eingest."],"note":["Gesehen am 22. Mai 2020"],"type":{"media":"Online-Ressource","bibl":"periodical"},"id":{"issn":["1752-0509"],"zdb":["2265490-2"],"eki":["522897126"]},"recId":"522897126","corporate":[{"role":"isb","display":"Biomed Central"}],"origin":[{"dateIssuedDisp":"2007-2019","dateIssuedKey":"2007","publisherPlace":"London","publisher":"BioMed Central"}],"disp":"CytoASP a Cytoscape app for qualitative consistency reasoning, prediction and repair in biological networksBMC systems biology"}],"name":{"displayForm":["Aristotelis Kittas, Amélie Barozet, Jekaterina Sereshti, Niels Grabe and Sophia Tsoka"]},"origin":[{"dateIssuedKey":"2015","dateIssuedDisp":"11 July 2015"}],"id":{"eki":["1703446127"],"doi":["10.1186/s12918-015-0179-6"]},"recId":"1703446127","type":{"bibl":"article-journal","media":"Online-Ressource"},"person":[{"display":"Kittas, Aristotelis","family":"Kittas","role":"aut","given":"Aristotelis"},{"given":"Amélie","display":"Barozet, Amélie","role":"aut","family":"Barozet"},{"given":"Jekaterina","family":"Sereshti","role":"aut","display":"Sereshti, Jekaterina"},{"role":"aut","family":"Grabe","display":"Grabe, Niels","given":"Niels"},{"role":"aut","family":"Tsoka","display":"Tsoka, Sophia","given":"Sophia"}],"note":["Gesehen am 03.07.2020"],"language":["eng"]} | ||
| SRT | |a KITTASARISCYTOASP1120 | ||