A benchmark for comparison of cell tracking algorithms

Abstract. Motivation: Automatic tracking of cells in multidimensional time-lapse fluorescence microscopy is an important task in many biomedical applications.

Saved in:
Bibliographic Details
Main Authors: Mas̆ka, Martin (Author) , Ulman, Vladimír (Author) , Svoboda, David (Author) , Matula, Pavel (Author) , Matula, Petr (Author) , Ederra, Cristina (Author) , Urbiola, Ainhoa (Author) , España, Tomás (Author) , Venkatesan, Subramanian (Author) , Balak, Deepak M. W. (Author) , Karas, Pavel (Author) , Bolcková, Tereza (Author) , Štreitová, Markéta (Author) , Carthel, Craig (Author) , Coraluppi, Stefano (Author) , Harder, Nathalie (Author) , Rohr, Karl (Author) , Magnusson, Klas E. G. (Author) , Jaldén, Joakim (Author) , Blau, Helen M. (Author) , Dzyubachyk, Oleh (Author) , Křížek, Pavel (Author) , Hagen, Guy M. (Author) , Pastor-Escuredo, David (Author) , Jimenez-Carretero, Daniel (Author) , Ledesma-Carbayo, Maria J. (Author) , Muñoz-Barrutia, Arrate (Author) , Meijering, Erik (Author) , Kozubek, Michal (Author) , Ortiz-de-Solorzano, Carlos (Author)
Format: Article (Journal)
Language:English
Published: February 12, 2014
In: Bioinformatics
Year: 2014, Volume: 30, Issue: 11, Pages: 1609-1617
ISSN:1367-4811
DOI:10.1093/bioinformatics/btu080
Online Access:Verlag, lizenzpflichtig, Volltext: https://doi.org/10.1093/bioinformatics/btu080
Verlag, lizenzpflichtig, Volltext: https://academic.oup.com/bioinformatics/article/30/11/1609/283435
Get full text
Author Notes:Martin Maška, Vladimír Ulman, David Svoboda, Pavel Matula, Petr Matula, Cristina Ederra, Ainhoa Urbiola, Tomás España, Subramanian Venkatesan, Deepak M.W. Balak, Pavel Karas, Tereza Bolcková, Markéta Štreitová, Craig Carthel, Stefano Coraluppi, Nathalie Harder, Karl Rohr, Klas E.G. Magnusson, Joakim Jaldén, Helen M. Blau, Oleh Dzyubachyk, Pavel Křížek, Guy M. Hagen, David Pastor-Escuredo, Daniel Jimenez-Carretero, Maria J. Ledesma-Carbayo, Arrate Muñoz-Barrutia, Erik Meijering, Michal Kozubek and Carlos Ortiz-de-Solorzano

MARC

LEADER 00000caa a2200000 c 4500
001 1727164725
003 DE-627
005 20230427022514.0
007 cr uuu---uuuuu
008 200817s2014 xx |||||o 00| ||eng c
024 7 |a 10.1093/bioinformatics/btu080  |2 doi 
035 |a (DE-627)1727164725 
035 |a (DE-599)KXP1727164725 
035 |a (OCoLC)1341355478 
040 |a DE-627  |b ger  |c DE-627  |e rda 
041 |a eng 
084 |a 33  |2 sdnb 
100 1 |a Mas̆ka, Martin  |e VerfasserIn  |0 (DE-588)1216065721  |0 (DE-627)1727165233  |4 aut 
245 1 2 |a A benchmark for comparison of cell tracking algorithms  |c Martin Maška, Vladimír Ulman, David Svoboda, Pavel Matula, Petr Matula, Cristina Ederra, Ainhoa Urbiola, Tomás España, Subramanian Venkatesan, Deepak M.W. Balak, Pavel Karas, Tereza Bolcková, Markéta Štreitová, Craig Carthel, Stefano Coraluppi, Nathalie Harder, Karl Rohr, Klas E.G. Magnusson, Joakim Jaldén, Helen M. Blau, Oleh Dzyubachyk, Pavel Křížek, Guy M. Hagen, David Pastor-Escuredo, Daniel Jimenez-Carretero, Maria J. Ledesma-Carbayo, Arrate Muñoz-Barrutia, Erik Meijering, Michal Kozubek and Carlos Ortiz-de-Solorzano 
264 1 |c February 12, 2014 
300 |a 9 
336 |a Text  |b txt  |2 rdacontent 
337 |a Computermedien  |b c  |2 rdamedia 
338 |a Online-Ressource  |b cr  |2 rdacarrier 
500 |a Gesehen am 17.08.2020 
520 |a Abstract. Motivation: Automatic tracking of cells in multidimensional time-lapse fluorescence microscopy is an important task in many biomedical applications. 
700 1 |a Ulman, Vladimír  |e VerfasserIn  |4 aut 
700 1 |a Svoboda, David  |e VerfasserIn  |4 aut 
700 1 |a Matula, Pavel  |e VerfasserIn  |4 aut 
700 1 |a Matula, Petr  |e VerfasserIn  |4 aut 
700 1 |a Ederra, Cristina  |e VerfasserIn  |4 aut 
700 1 |a Urbiola, Ainhoa  |e VerfasserIn  |4 aut 
700 1 |a España, Tomás  |e VerfasserIn  |4 aut 
700 1 |a Venkatesan, Subramanian  |e VerfasserIn  |4 aut 
700 1 |a Balak, Deepak M. W.  |e VerfasserIn  |4 aut 
700 1 |a Karas, Pavel  |e VerfasserIn  |4 aut 
700 1 |a Bolcková, Tereza  |e VerfasserIn  |4 aut 
700 1 |a Štreitová, Markéta  |e VerfasserIn  |4 aut 
700 1 |a Carthel, Craig  |e VerfasserIn  |4 aut 
700 1 |a Coraluppi, Stefano  |e VerfasserIn  |4 aut 
700 1 |a Harder, Nathalie  |e VerfasserIn  |0 (DE-588)1073949370  |0 (DE-627)830053417  |0 (DE-576)327502266  |4 aut 
700 1 |a Rohr, Karl  |e VerfasserIn  |0 (DE-588)137474466  |0 (DE-627)695829440  |0 (DE-576)303788593  |4 aut 
700 1 |a Magnusson, Klas E. G.  |e VerfasserIn  |4 aut 
700 1 |a Jaldén, Joakim  |e VerfasserIn  |4 aut 
700 1 |a Blau, Helen M.  |e VerfasserIn  |4 aut 
700 1 |a Dzyubachyk, Oleh  |e VerfasserIn  |4 aut 
700 1 |a Křížek, Pavel  |e VerfasserIn  |4 aut 
700 1 |a Hagen, Guy M.  |e VerfasserIn  |4 aut 
700 1 |a Pastor-Escuredo, David  |e VerfasserIn  |4 aut 
700 1 |a Jimenez-Carretero, Daniel  |e VerfasserIn  |4 aut 
700 1 |a Ledesma-Carbayo, Maria J.  |e VerfasserIn  |4 aut 
700 1 |a Muñoz-Barrutia, Arrate  |e VerfasserIn  |4 aut 
700 1 |a Meijering, Erik  |e VerfasserIn  |4 aut 
700 1 |a Kozubek, Michal  |e VerfasserIn  |4 aut 
700 1 |a Ortiz-de-Solorzano, Carlos  |e VerfasserIn  |4 aut 
773 0 8 |i Enthalten in  |t Bioinformatics  |d Oxford : Oxford Univ. Press, 1998  |g 30(2014), 11, Seite 1609-1617  |h Online-Ressource  |w (DE-627)266884857  |w (DE-600)1468345-3  |w (DE-576)079420133  |x 1367-4811  |7 nnas  |a A benchmark for comparison of cell tracking algorithms 
773 1 8 |g volume:30  |g year:2014  |g number:11  |g pages:1609-1617  |g extent:9  |a A benchmark for comparison of cell tracking algorithms 
856 4 0 |u https://doi.org/10.1093/bioinformatics/btu080  |x Verlag  |x Resolving-System  |z lizenzpflichtig  |3 Volltext 
856 4 0 |u https://academic.oup.com/bioinformatics/article/30/11/1609/283435  |x Verlag  |z lizenzpflichtig  |3 Volltext 
951 |a AR 
992 |a 20200817 
993 |a Article 
994 |a 2014 
998 |g 137474466  |a Rohr, Karl  |m 137474466:Rohr, Karl  |d 160000  |d 160100  |e 160000PR137474466  |e 160100PR137474466  |k 0/160000/  |k 1/160000/160100/  |p 17 
998 |g 1073949370  |a Harder, Nathalie  |m 1073949370:Harder, Nathalie  |d 160000  |d 160100  |e 160000PH1073949370  |e 160100PH1073949370  |k 0/160000/  |k 1/160000/160100/  |p 16 
999 |a KXP-PPN1727164725  |e 3740520957 
BIB |a Y 
SER |a journal 
JSO |a {"physDesc":[{"extent":"9 S."}],"id":{"eki":["1727164725"],"doi":["10.1093/bioinformatics/btu080"]},"type":{"bibl":"article-journal","media":"Online-Ressource"},"note":["Gesehen am 17.08.2020"],"relHost":[{"origin":[{"dateIssuedDisp":"1998-","publisher":"Oxford Univ. Press","publisherPlace":"Oxford","dateIssuedKey":"1998"}],"title":[{"title":"Bioinformatics","title_sort":"Bioinformatics"}],"id":{"eki":["266884857"],"issn":["1367-4811"],"zdb":["1468345-3"]},"part":{"pages":"1609-1617","year":"2014","text":"30(2014), 11, Seite 1609-1617","volume":"30","issue":"11","extent":"9"},"physDesc":[{"extent":"Online-Ressource"}],"note":["Gesehen am 26.07.2023","Fortsetzung der Druck-Ausgabe"],"recId":"266884857","disp":"A benchmark for comparison of cell tracking algorithmsBioinformatics","titleAlt":[{"title":"Bioinformatics online"}],"language":["eng"],"pubHistory":["14.1998 -"],"type":{"bibl":"periodical","media":"Online-Ressource"}}],"person":[{"role":"aut","family":"Mas̆ka","given":"Martin","display":"Mas̆ka, Martin"},{"role":"aut","display":"Ulman, Vladimír","given":"Vladimír","family":"Ulman"},{"family":"Svoboda","given":"David","display":"Svoboda, David","role":"aut"},{"given":"Pavel","display":"Matula, Pavel","family":"Matula","role":"aut"},{"role":"aut","given":"Petr","display":"Matula, Petr","family":"Matula"},{"family":"Ederra","given":"Cristina","display":"Ederra, Cristina","role":"aut"},{"role":"aut","given":"Ainhoa","display":"Urbiola, Ainhoa","family":"Urbiola"},{"role":"aut","display":"España, Tomás","given":"Tomás","family":"España"},{"role":"aut","display":"Venkatesan, Subramanian","given":"Subramanian","family":"Venkatesan"},{"role":"aut","given":"Deepak M. W.","display":"Balak, Deepak M. W.","family":"Balak"},{"display":"Karas, Pavel","given":"Pavel","family":"Karas","role":"aut"},{"role":"aut","given":"Tereza","display":"Bolcková, Tereza","family":"Bolcková"},{"family":"Štreitová","display":"Štreitová, Markéta","given":"Markéta","role":"aut"},{"role":"aut","given":"Craig","display":"Carthel, Craig","family":"Carthel"},{"role":"aut","display":"Coraluppi, Stefano","given":"Stefano","family":"Coraluppi"},{"display":"Harder, Nathalie","given":"Nathalie","family":"Harder","role":"aut"},{"given":"Karl","display":"Rohr, Karl","family":"Rohr","role":"aut"},{"role":"aut","family":"Magnusson","display":"Magnusson, Klas E. G.","given":"Klas E. G."},{"family":"Jaldén","display":"Jaldén, Joakim","given":"Joakim","role":"aut"},{"display":"Blau, Helen M.","given":"Helen M.","family":"Blau","role":"aut"},{"role":"aut","given":"Oleh","display":"Dzyubachyk, Oleh","family":"Dzyubachyk"},{"family":"Křížek","given":"Pavel","display":"Křížek, Pavel","role":"aut"},{"role":"aut","display":"Hagen, Guy M.","given":"Guy M.","family":"Hagen"},{"family":"Pastor-Escuredo","display":"Pastor-Escuredo, David","given":"David","role":"aut"},{"display":"Jimenez-Carretero, Daniel","given":"Daniel","family":"Jimenez-Carretero","role":"aut"},{"role":"aut","display":"Ledesma-Carbayo, Maria J.","given":"Maria J.","family":"Ledesma-Carbayo"},{"family":"Muñoz-Barrutia","given":"Arrate","display":"Muñoz-Barrutia, Arrate","role":"aut"},{"role":"aut","given":"Erik","display":"Meijering, Erik","family":"Meijering"},{"display":"Kozubek, Michal","given":"Michal","family":"Kozubek","role":"aut"},{"given":"Carlos","display":"Ortiz-de-Solorzano, Carlos","family":"Ortiz-de-Solorzano","role":"aut"}],"origin":[{"dateIssuedKey":"2014","dateIssuedDisp":"February 12, 2014"}],"name":{"displayForm":["Martin Maška, Vladimír Ulman, David Svoboda, Pavel Matula, Petr Matula, Cristina Ederra, Ainhoa Urbiola, Tomás España, Subramanian Venkatesan, Deepak M.W. Balak, Pavel Karas, Tereza Bolcková, Markéta Štreitová, Craig Carthel, Stefano Coraluppi, Nathalie Harder, Karl Rohr, Klas E.G. Magnusson, Joakim Jaldén, Helen M. Blau, Oleh Dzyubachyk, Pavel Křížek, Guy M. Hagen, David Pastor-Escuredo, Daniel Jimenez-Carretero, Maria J. Ledesma-Carbayo, Arrate Muñoz-Barrutia, Erik Meijering, Michal Kozubek and Carlos Ortiz-de-Solorzano"]},"recId":"1727164725","title":[{"title":"A benchmark for comparison of cell tracking algorithms","title_sort":"benchmark for comparison of cell tracking algorithms"}],"language":["eng"]} 
SRT |a MASKAMARTIBENCHMARKF1220