CRISPR/Cas12a-mediated labeling of MET receptor enables quantitative single-molecule imaging of endogenous protein organization and dynamics

Single-molecule localization microscopy (SMLM) reports on protein organization in cells with near-molecular resolution and in combination with stoichiometric labeling enables protein counting. Fluorescent proteins allow stoichiometric labeling of cellular proteins; however, most methods either lead...

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Main Authors: Baldering, Tim N. (Author) , Karathanasis, Christos (Author) , Harwardt, Marie-Lena I. E. (Author) , Freund, Petra (Author) , Meurer, Matthias (Author) , Rahm, Johanna V. (Author) , Knop, Michael (Author) , Dietz, Marina S. (Author) , Heilemann, Mike (Author)
Format: Article (Journal)
Language:English
Published: 2021
In: iScience
Year: 2020, Volume: 24, Issue: 1
ISSN:2589-0042
DOI:10.1016/j.isci.2020.101895
Online Access:Verlag, lizenzpflichtig, Volltext: https://doi.org/10.1016/j.isci.2020.101895
Verlag, lizenzpflichtig, Volltext: https://www.sciencedirect.com/science/article/pii/S2589004220310920
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Author Notes:Tim N. Baldering, Christos Karathanasis, Marie-Lena I.E. Harwardt, Petra Freund, Matthias Meurer, Johanna V. Rahm, Michael Knop, Marina S. Dietz, and Mike Heilemann

MARC

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520 |a Single-molecule localization microscopy (SMLM) reports on protein organization in cells with near-molecular resolution and in combination with stoichiometric labeling enables protein counting. Fluorescent proteins allow stoichiometric labeling of cellular proteins; however, most methods either lead to overexpression or are complex and time demanding. We introduce CRISPR/Cas12a for simple and efficient tagging of endogenous proteins with a photoactivatable protein for quantitative SMLM and single-particle tracking. We constructed a HEK293T cell line with the receptor tyrosine kinase MET tagged with mEos4b and demonstrate full functionality. We determine the oligomeric state of MET with quantitative SMLM and find a reorganization from monomeric to dimeric MET upon ligand stimulation. In addition, we measured the mobility of single MET receptors in vivo in resting and ligand-treated cells. The combination of CRISPR/Cas12a-assisted endogenous protein labeling and super-resolution microscopy represents a powerful tool for cell biological research with molecular resolution. 
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