Superhelical DNA studied by solution scattering and computer models

We present here recent results on the structure of superhelical DNA and its changes with salt concentration between 0.01 and 1.5 M NaCl. Scattering curves of two different superhelical DNAs were determined by static light scattering. The measured radii of gyration do not change significantly with sa...

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Hauptverfasser: Langowski, Jörg (VerfasserIn) , Klenin, Konstantin (VerfasserIn) , Tóth, Katalin (VerfasserIn)
Dokumenttyp: Article (Journal)
Sprache:Englisch
Veröffentlicht: June 1999
In: Genetica
Year: 1999, Jahrgang: 106, Heft: 1, Pages: 49-55
ISSN:1573-6857
DOI:10.1023/A:1003720610089
Online-Zugang:Verlag, lizenzpflichtig, Volltext: https://doi.org/10.1023/A:1003720610089
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Verfasserangaben:Jörg Langowski, Markus Hammermann, Konstantin Klenin, Roland May & Katalin Tóth

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520 |a We present here recent results on the structure of superhelical DNA and its changes with salt concentration between 0.01 and 1.5 M NaCl. Scattering curves of two different superhelical DNAs were determined by static light scattering. The measured radii of gyration do not change significantly with salt concentration. Small-angle neutron scattering, together with calculations from a Monte Carlo model, allows to determine the superhelix diameter. Measured and simulated scattering curves agreed almost quantitatively. Experimentally we find that the diameter decreases from 16.0±0.9 nm at 10 mM to 9.0±0.7 nm at 100 mM NaCl. The superhelix diameter from the simulated conformations decreased from 18.0±1.5 nm at 10 mM to 9.4±1.5 nm at 100 mM NaCl. At higher salt concentrations up to 1.5 M NaCl, the diameter stays constant at 9 nm. 
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