Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use cases
This article describes some use case studies and self-assessments of FAIR status of de.NBI services to illustrate the challenges and requirements for the definition of the needs of adhering to the FAIR (findable, accessible, interoperable and reusable) data principles in a large distributed bioinfor...
Gespeichert in:
| Hauptverfasser: | , , , , , , , , , , , , , , , , , , , , , , , , |
|---|---|
| Dokumenttyp: | Article (Journal) |
| Sprache: | Englisch |
| Veröffentlicht: |
16 February 2021
|
| In: |
Briefings in bioinformatics
Year: 2021, Jahrgang: 22, Heft: 5, Pages: 1-14 |
| ISSN: | 1477-4054 |
| DOI: | 10.1093/bib/bbab010 |
| Online-Zugang: | Verlag, lizenzpflichtig, Volltext: https://doi.org/10.1093/bib/bbab010
|
| Verfasserangaben: | Gerhard Mayer, Wolfgang Müller, Karin Schork, Julian Uszkoreit, Andreas Weidemann, Ulrike Wittig, Maja Rey, Christian Quast, Janine Felden, Frank Oliver Glöckner, Matthias Lange, Daniel Arend, Sebastian Beier, Astrid Junker, Uwe Scholz, Danuta Schüler, Hans A Kestler, Daniel Wibberg, Alfred Pühler, Sven Twardziok, Jürgen Eils, Roland Eils, Steve Hoffmann, Martin Eisenacher and Michael Turewicz |
MARC
| LEADER | 00000caa a2200000 c 4500 | ||
|---|---|---|---|
| 001 | 1782240683 | ||
| 003 | DE-627 | ||
| 005 | 20230920154600.0 | ||
| 007 | cr uuu---uuuuu | ||
| 008 | 211215s2021 xx |||||o 00| ||eng c | ||
| 024 | 7 | |a 10.1093/bib/bbab010 |2 doi | |
| 035 | |a (DE-627)1782240683 | ||
| 035 | |a (DE-599)KXP1782240683 | ||
| 035 | |a (OCoLC)1341436215 | ||
| 040 | |a DE-627 |b ger |c DE-627 |e rda | ||
| 041 | |a eng | ||
| 084 | |a 33 |2 sdnb | ||
| 100 | 1 | |a Mayer, Gerhard |e VerfasserIn |0 (DE-588)1019714506 |0 (DE-627)690999879 |0 (DE-576)358702534 |4 aut | |
| 245 | 1 | 0 | |a Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use cases |c Gerhard Mayer, Wolfgang Müller, Karin Schork, Julian Uszkoreit, Andreas Weidemann, Ulrike Wittig, Maja Rey, Christian Quast, Janine Felden, Frank Oliver Glöckner, Matthias Lange, Daniel Arend, Sebastian Beier, Astrid Junker, Uwe Scholz, Danuta Schüler, Hans A Kestler, Daniel Wibberg, Alfred Pühler, Sven Twardziok, Jürgen Eils, Roland Eils, Steve Hoffmann, Martin Eisenacher and Michael Turewicz |
| 264 | 1 | |c 16 February 2021 | |
| 300 | |a 14 | ||
| 336 | |a Text |b txt |2 rdacontent | ||
| 337 | |a Computermedien |b c |2 rdamedia | ||
| 338 | |a Online-Ressource |b cr |2 rdacarrier | ||
| 500 | |a Gesehen am 15.12.2021 | ||
| 520 | |a This article describes some use case studies and self-assessments of FAIR status of de.NBI services to illustrate the challenges and requirements for the definition of the needs of adhering to the FAIR (findable, accessible, interoperable and reusable) data principles in a large distributed bioinformatics infrastructure. We address the challenge of heterogeneity of wet lab technologies, data, metadata, software, computational workflows and the levels of implementation and monitoring of FAIR principles within the different bioinformatics sub-disciplines joint in de.NBI. On the one hand, this broad service landscape and the excellent network of experts are a strong basis for the development of useful research data management plans. On the other hand, the large number of tools and techniques maintained by distributed teams renders FAIR compliance challenging. | ||
| 700 | 1 | |a Müller, Wolfgang |e VerfasserIn |4 aut | |
| 700 | 1 | |a Schork, Karin |e VerfasserIn |4 aut | |
| 700 | 1 | |a Uszkoreit, Julian |e VerfasserIn |4 aut | |
| 700 | 1 | |a Weidemann, Andreas |e VerfasserIn |4 aut | |
| 700 | 1 | |a Wittig, Ulrike |e VerfasserIn |4 aut | |
| 700 | 1 | |a Rey, Maja |e VerfasserIn |4 aut | |
| 700 | 1 | |a Quast, Christian |e VerfasserIn |4 aut | |
| 700 | 1 | |a Felden, Janine |e VerfasserIn |4 aut | |
| 700 | 1 | |a Glöckner, Frank Oliver |e VerfasserIn |0 (DE-588)1107565405 |0 (DE-627)863514359 |0 (DE-576)475081218 |4 aut | |
| 700 | 1 | |a Lange, Matthias |e VerfasserIn |4 aut | |
| 700 | 1 | |a Arend, Daniel |e VerfasserIn |4 aut | |
| 700 | 1 | |a Beier, Sebastian |e VerfasserIn |4 aut | |
| 700 | 1 | |a Junker, Astrid |e VerfasserIn |4 aut | |
| 700 | 1 | |a Scholz, Uwe |e VerfasserIn |4 aut | |
| 700 | 1 | |a Schüler, Danuta |e VerfasserIn |4 aut | |
| 700 | 1 | |a Kestler, Hans A |e VerfasserIn |4 aut | |
| 700 | 1 | |a Wibberg, Daniel |e VerfasserIn |4 aut | |
| 700 | 1 | |a Pühler, Alfred |e VerfasserIn |4 aut | |
| 700 | 1 | |a Twardziok, Sven |e VerfasserIn |4 aut | |
| 700 | 1 | |a Eils, Jürgen |e VerfasserIn |4 aut | |
| 700 | 1 | |a Eils, Roland |d 1965- |e VerfasserIn |0 (DE-588)1020648287 |0 (DE-627)691291705 |0 (DE-576)361718195 |4 aut | |
| 700 | 1 | |a Hoffmann, Steve |e VerfasserIn |4 aut | |
| 700 | 1 | |a Eisenacher, Martin |e VerfasserIn |4 aut | |
| 700 | 1 | |a Turewicz, Michael |e VerfasserIn |4 aut | |
| 773 | 0 | 8 | |i Enthalten in |t Briefings in bioinformatics |d Oxford [u.a.] : Oxford University Press, 2000 |g 22(2021), 5, Artikel-ID bbab010, Seite 1-14 |h Online-Ressource |w (DE-627)325359237 |w (DE-600)2036055-1 |w (DE-576)099210959 |x 1477-4054 |7 nnas |a Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use cases |
| 773 | 1 | 8 | |g volume:22 |g year:2021 |g number:5 |g elocationid:bbab010 |g pages:1-14 |g extent:14 |a Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use cases |
| 856 | 4 | 0 | |u https://doi.org/10.1093/bib/bbab010 |x Verlag |x Resolving-System |z lizenzpflichtig |3 Volltext |
| 951 | |a AR | ||
| 992 | |a 20211215 | ||
| 993 | |a Article | ||
| 994 | |a 2021 | ||
| 998 | |g 1020648287 |a Eils, Roland |m 1020648287:Eils, Roland |d 910000 |d 999701 |d 50000 |e 910000PE1020648287 |e 999701PE1020648287 |e 50000PE1020648287 |k 0/910000/ |k 1/910000/999701/ |k 0/50000/ |p 22 | ||
| 999 | |a KXP-PPN1782240683 |e 402045454X | ||
| BIB | |a Y | ||
| SER | |a journal | ||
| JSO | |a {"origin":[{"dateIssuedDisp":"16 February 2021","dateIssuedKey":"2021"}],"recId":"1782240683","physDesc":[{"extent":"14 S."}],"name":{"displayForm":["Gerhard Mayer, Wolfgang Müller, Karin Schork, Julian Uszkoreit, Andreas Weidemann, Ulrike Wittig, Maja Rey, Christian Quast, Janine Felden, Frank Oliver Glöckner, Matthias Lange, Daniel Arend, Sebastian Beier, Astrid Junker, Uwe Scholz, Danuta Schüler, Hans A Kestler, Daniel Wibberg, Alfred Pühler, Sven Twardziok, Jürgen Eils, Roland Eils, Steve Hoffmann, Martin Eisenacher and Michael Turewicz"]},"note":["Gesehen am 15.12.2021"],"person":[{"role":"aut","family":"Mayer","given":"Gerhard","display":"Mayer, Gerhard"},{"role":"aut","family":"Müller","given":"Wolfgang","display":"Müller, Wolfgang"},{"family":"Schork","role":"aut","display":"Schork, Karin","given":"Karin"},{"display":"Uszkoreit, Julian","given":"Julian","family":"Uszkoreit","role":"aut"},{"family":"Weidemann","role":"aut","display":"Weidemann, Andreas","given":"Andreas"},{"role":"aut","family":"Wittig","given":"Ulrike","display":"Wittig, Ulrike"},{"role":"aut","family":"Rey","given":"Maja","display":"Rey, Maja"},{"family":"Quast","role":"aut","display":"Quast, Christian","given":"Christian"},{"display":"Felden, Janine","given":"Janine","family":"Felden","role":"aut"},{"given":"Frank Oliver","display":"Glöckner, Frank Oliver","role":"aut","family":"Glöckner"},{"given":"Matthias","display":"Lange, Matthias","role":"aut","family":"Lange"},{"family":"Arend","role":"aut","display":"Arend, Daniel","given":"Daniel"},{"role":"aut","family":"Beier","given":"Sebastian","display":"Beier, Sebastian"},{"display":"Junker, Astrid","given":"Astrid","family":"Junker","role":"aut"},{"given":"Uwe","display":"Scholz, Uwe","role":"aut","family":"Scholz"},{"display":"Schüler, Danuta","given":"Danuta","family":"Schüler","role":"aut"},{"role":"aut","family":"Kestler","given":"Hans A","display":"Kestler, Hans A"},{"family":"Wibberg","role":"aut","display":"Wibberg, Daniel","given":"Daniel"},{"family":"Pühler","role":"aut","display":"Pühler, Alfred","given":"Alfred"},{"given":"Sven","display":"Twardziok, Sven","role":"aut","family":"Twardziok"},{"family":"Eils","role":"aut","display":"Eils, Jürgen","given":"Jürgen"},{"role":"aut","family":"Eils","given":"Roland","display":"Eils, Roland"},{"role":"aut","family":"Hoffmann","given":"Steve","display":"Hoffmann, Steve"},{"role":"aut","family":"Eisenacher","given":"Martin","display":"Eisenacher, Martin"},{"role":"aut","family":"Turewicz","given":"Michael","display":"Turewicz, Michael"}],"title":[{"title":"Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use cases","title_sort":"Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use cases"}],"id":{"doi":["10.1093/bib/bbab010"],"eki":["1782240683"]},"type":{"bibl":"article-journal","media":"Online-Ressource"},"language":["eng"],"relHost":[{"note":["Gesehen am 18.01.24"],"id":{"eki":["325359237"],"zdb":["2036055-1"],"issn":["1477-4054"]},"title":[{"title":"Briefings in bioinformatics","title_sort":"Briefings in bioinformatics"}],"physDesc":[{"extent":"Online-Ressource"}],"recId":"325359237","origin":[{"publisher":"Oxford University Press ; Henry Stewart Publ.","dateIssuedDisp":"2000-","publisherPlace":"Oxford [u.a.] ; London [u.a.]","dateIssuedKey":"2000"}],"disp":"Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use casesBriefings in bioinformatics","language":["eng"],"pubHistory":["1.2000 -"],"type":{"bibl":"periodical","media":"Online-Ressource"},"part":{"volume":"22","pages":"1-14","year":"2021","issue":"5","extent":"14","text":"22(2021), 5, Artikel-ID bbab010, Seite 1-14"}}]} | ||
| SRT | |a MAYERGERHAIMPLEMENTI1620 | ||