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Epigenetic analysis leads to identification of HNF1B as a subtype-specific susceptibility gene for ovarian cancer

HNF1B is overexpressed in clear cell epithelial ovarian cancer, and we observed epigenetic silencing in serous epithelial ovarian cancer, leading us to hypothesize that variation in this gene differentially associates with epithelial ovarian cancer risk according to histological subtype. Here we com...

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Hauptverfasser: Shen, Hui (VerfasserIn) , Fridley, Brooke L. (VerfasserIn) , Song, Honglin (VerfasserIn) , Lawrenson, Kate (VerfasserIn) , Cunningham, Julie M. (VerfasserIn) , Ramus, Susan J. (VerfasserIn) , Cicek, Mine S. (VerfasserIn) , Tyrer, Jonathan (VerfasserIn) , Stram, Douglas (VerfasserIn) , Larson, Melissa C. (VerfasserIn) , Köbel, Martin (VerfasserIn) , Ziogas, Argyrios (VerfasserIn) , Zheng, Wei (VerfasserIn) , Yang, Hannah P. (VerfasserIn) , Wu, Anna H. (VerfasserIn) , Wozniak, Eva L. (VerfasserIn) , Ling Woo, Yin (VerfasserIn) , Winterhoff, Boris (VerfasserIn) , Wik, Elisabeth (VerfasserIn) , Whittemore, Alice S. (VerfasserIn) , Wentzensen, Nicolas (VerfasserIn) , Palmieri Weber, Rachel (VerfasserIn) , Vitonis, Allison F. (VerfasserIn) , Vincent, Daniel (VerfasserIn) , Vierkant, Robert A. (VerfasserIn) , Vergote, Ignace (VerfasserIn) , Van Den Berg, David (VerfasserIn) , Van Altena, Anne M. (VerfasserIn) , Tworoger, Shelley S. (VerfasserIn) , Thompson, Pamela J. (VerfasserIn) , Tessier, Daniel C. (VerfasserIn) , Terry, Kathryn L. (VerfasserIn) , Teo, Soo-Hwang (VerfasserIn) , Templeman, Claire (VerfasserIn) , Stram, Daniel O. (VerfasserIn) , Southey, Melissa C. (VerfasserIn) , Sieh, Weiva (VerfasserIn) , Siddiqui, Nadeem (VerfasserIn) , Shvetsov, Yurii B. (VerfasserIn) , Shu, Xiao-Ou (VerfasserIn) , Shridhar, Viji (VerfasserIn) , Wang-Gohrke, Shan (VerfasserIn) , Severi, Gianluca (VerfasserIn) , Schwaab, Ira (VerfasserIn) , Salvesen, Helga B. (VerfasserIn) , Rzepecka, Iwona K. (VerfasserIn) , Runnebaum, Ingo B. (VerfasserIn) , Anne Rossing, Mary (VerfasserIn) , Rodriguez-Rodriguez, Lorna (VerfasserIn) , Risch, Harvey A. (VerfasserIn) , Renner, Stefan P. (VerfasserIn) , Poole, Elizabeth M. (VerfasserIn) , Pike, Malcolm C. (VerfasserIn) , Phelan, Catherine M. (VerfasserIn) , Pelttari, Liisa M. (VerfasserIn) , Pejovic, Tanja (VerfasserIn) , Paul, James (VerfasserIn) , Orlow, Irene (VerfasserIn) , Zawiah Omar, Siti (VerfasserIn) , Olson, Sara H. (VerfasserIn) , Odunsi, Kunle (VerfasserIn) , Nickels, Stefan (VerfasserIn) , Nevanlinna, Heli (VerfasserIn) , Ness, Roberta B. (VerfasserIn) , Narod, Steven A. (VerfasserIn) , Nakanishi, Toru (VerfasserIn) , Moysich, Kirsten B. (VerfasserIn) , Monteiro, Alvaro N. A. (VerfasserIn) , Moes-Sosnowska, Joanna (VerfasserIn) , Modugno, Francesmary (VerfasserIn) , Menon, Usha (VerfasserIn) , McLaughlin, John R. (VerfasserIn) , McGuire, Valerie (VerfasserIn) , Matsuo, Keitaro (VerfasserIn) , Mat Adenan, Noor Azmi (VerfasserIn) , Massuger, Leon F. A. G. (VerfasserIn) , Lurie, Galina (VerfasserIn) , Lundvall, Lene (VerfasserIn) , Lubiński, Jan (VerfasserIn) , Lissowska, Jolanta (VerfasserIn) , Levine, Douglas A. (VerfasserIn) , Leminen, Arto (VerfasserIn) , Lee, Alice W. (VerfasserIn) , Le, Nhu D. (VerfasserIn) , Lambrechts, Sandrina (VerfasserIn) , Lambrechts, Diether (VerfasserIn) , Kupryjanczyk, Jolanta (VerfasserIn) , Krakstad, Camilla (VerfasserIn) , Konecny, Gottfried E. (VerfasserIn) , Krüger Kjaer, Susanne (VerfasserIn) , Kiemeney, Lambertus A. (VerfasserIn) , Kelemen, Linda E. (VerfasserIn) , Keeney, Gary L. (VerfasserIn) , Karlan, Beth Y. (VerfasserIn) , Karevan, Rod (VerfasserIn) , Kalli, Kimberly R. (VerfasserIn) , Kajiyama, Hiroaki (VerfasserIn) , Ji, Bu-Tian (VerfasserIn) , Jensen, Allan (VerfasserIn) , Jakubowska, Anna (VerfasserIn) , Iversen, Edwin (VerfasserIn) , Hosono, Satoyo (VerfasserIn) , Høgdall, Claus K. (VerfasserIn) , Høgdall, Estrid (VerfasserIn) , Hoatlin, Maureen (VerfasserIn) , Hillemanns, Peter (VerfasserIn) , Heitz, Florian (VerfasserIn) , Hein, Rebecca (VerfasserIn) , Harter, Philipp (VerfasserIn) , Halle, Mari K. (VerfasserIn) , Hall, Per (VerfasserIn) , Gronwald, Jacek (VerfasserIn) , Gore, Martin (VerfasserIn) , Goodman, Marc T. (VerfasserIn) , Giles, Graham G. (VerfasserIn) , Gentry-Maharaj, Aleksandra (VerfasserIn) , Garcia-Closas, Montserrat (VerfasserIn) , Flanagan, James M. (VerfasserIn) , Fasching, Peter A. (VerfasserIn) , Ekici, Arif B. (VerfasserIn) , Edwards, Robert (VerfasserIn) , Eccles, Diana (VerfasserIn) , Easton, Douglas F. (VerfasserIn) , Dürst, Matthias (VerfasserIn) , du Bois, Andreas (VerfasserIn) , Dörk, Thilo (VerfasserIn) , Doherty, Jennifer A. (VerfasserIn) , Despierre, Evelyn (VerfasserIn) , Dansonka-Mieszkowska, Agnieszka (VerfasserIn) , Cybulski, Cezary (VerfasserIn) , Cramer, Daniel W. (VerfasserIn) , Cook, Linda S. (VerfasserIn) , Chen, Xiaoqing (VerfasserIn) , Charbonneau, Bridget (VerfasserIn) , Chang-Claude, Jenny (VerfasserIn) , Campbell, Ian (VerfasserIn) , Butzow, Ralf (VerfasserIn) , Bunker, Clareann H. (VerfasserIn) , Brueggmann, Doerthe (VerfasserIn) , Brown, Robert (VerfasserIn) , Brooks-Wilson, Angela (VerfasserIn) , Brinton, Louise A. (VerfasserIn) , Bogdanova, Natalia (VerfasserIn) , Block, Matthew S. (VerfasserIn) , Benjamin, Elizabeth (VerfasserIn) , Beesley, Jonathan (VerfasserIn) , Beckmann, Matthias W. (VerfasserIn) , Bandera, Elisa V. (VerfasserIn) , Baglietto, Laura (VerfasserIn) , Bacot, François (VerfasserIn) , Armasu, Sebastian M. (VerfasserIn) , Antonenkova, Natalia (VerfasserIn) , Anton-Culver, Hoda (VerfasserIn) , Aben, Katja K. (VerfasserIn) , Liang, Dong (VerfasserIn) , Wu, Xifeng (VerfasserIn) , Lu, Karen (VerfasserIn) , Hildebrandt, Michelle A. T. (VerfasserIn) , Schildkraut, Joellen M. (VerfasserIn) , Sellers, Thomas A. (VerfasserIn) , Huntsman, David (VerfasserIn) , Berchuck, Andrew (VerfasserIn) , Chenevix-Trench, Georgia (VerfasserIn) , Gayther, Simon A. (VerfasserIn) , Pharoah, Paul D. P. (VerfasserIn) , Laird, Peter W. (VerfasserIn) , Goode, Ellen L. (VerfasserIn) , Leigh Pearce, Celeste (VerfasserIn)
Dokumenttyp: Article (Journal)
Sprache:Englisch
Veröffentlicht: 2013
In: Nature Communications
Year: 2013, Jahrgang: 4, Pages: 1-10
ISSN:2041-1723
DOI:10.1038/ncomms2629
Online-Zugang:Verlag, lizenzpflichtig, Volltext: https://doi.org/10.1038/ncomms2629
Verlag, lizenzpflichtig, Volltext: https://www.nature.com/articles/ncomms2629
Volltext
Verfasserangaben:Hui Shen, Brooke L. Fridley, Honglin Song et al.

MARC

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245 1 0 |a Epigenetic analysis leads to identification of HNF1B as a subtype-specific susceptibility gene for ovarian cancer  |c Hui Shen, Brooke L. Fridley, Honglin Song et al. 
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500 |a Gesehen am 24.01.2022 
520 |a HNF1B is overexpressed in clear cell epithelial ovarian cancer, and we observed epigenetic silencing in serous epithelial ovarian cancer, leading us to hypothesize that variation in this gene differentially associates with epithelial ovarian cancer risk according to histological subtype. Here we comprehensively map variation in HNF1B with respect to epithelial ovarian cancer risk and analyse DNA methylation and expression profiles across histological subtypes. Different single-nucleotide polymorphisms associate with invasive serous (rs7405776 odds ratio (OR)=1.13, P=3.1 × 10−10) and clear cell (rs11651755 OR=0.77, P=1.6 × 10−8) epithelial ovarian cancer. Risk alleles for the serous subtype associate with higher HNF1B-promoter methylation in these tumours. Unmethylated, expressed HNF1B, primarily present in clear cell tumours, coincides with a CpG island methylator phenotype affecting numerous other promoters throughout the genome. Different variants in HNF1B associate with risk of serous and clear cell epithelial ovarian cancer; DNA methylation and expression patterns are also notably distinct between these subtypes. These findings underscore distinct mechanisms driving different epithelial ovarian cancer histological subtypes. 
650 4 |a Cancer genetics 
650 4 |a Epigenetics analysis 
650 4 |a Ovarian cancer 
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700 1 |a Song, Honglin  |e VerfasserIn  |4 aut 
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700 1 |a Cunningham, Julie M.  |e VerfasserIn  |4 aut 
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700 1 |a Cicek, Mine S.  |e VerfasserIn  |4 aut 
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