Expanding the chemical scope of RNA: methyltransferases to site-specific alkynylation of RNA for click labeling

This work identifies the combination of enzymatic transfer and click labeling as an efficient method for the site-specific tagging of RNA molecules for biophysical studies. A double-activated analog of the ubiquitous co-substrate S -adenosyl- l -methionine was employed to enzymatically transfer a fi...

Full description

Saved in:
Bibliographic Details
Main Authors: Motorin, Yuri (Author) , Burhenne, Jürgen (Author) , Teimer, Roman (Author) , Koynov, Kaloian (Author) , Willnow, Sophie (Author) , Weinhold, Elmar (Author) , Helm, Mark (Author)
Format: Article (Journal)
Language:English
Published: 2011
In: Nucleic acids research
Year: 2011, Volume: 39, Issue: 5, Pages: 1943-1952
ISSN:1362-4962
DOI:10.1093/nar/gkq825
Online Access:Verlag, lizenzpflichtig, Volltext: https://doi.org/10.1093/nar/gkq825
Get full text
Author Notes:Yuri Motorin, Jürgen Burhenne, Roman Teimer, Kaloian Koynov, Sophie Willnow, Elmar Weinhold and Mark Helm

MARC

LEADER 00000caa a2200000 c 4500
001 1816299421
003 DE-627
005 20230710120234.0
007 cr uuu---uuuuu
008 220908s2011 xx |||||o 00| ||eng c
024 7 |a 10.1093/nar/gkq825  |2 doi 
035 |a (DE-627)1816299421 
035 |a (DE-599)KXP1816299421 
035 |a (OCoLC)1389792146 
040 |a DE-627  |b ger  |c DE-627  |e rda 
041 |a eng 
084 |a 33  |2 sdnb 
100 1 |a Motorin, Yuri  |e VerfasserIn  |0 (DE-588)1267635282  |0 (DE-627)1816299197  |4 aut 
245 1 0 |a Expanding the chemical scope of RNA  |b methyltransferases to site-specific alkynylation of RNA for click labeling  |c Yuri Motorin, Jürgen Burhenne, Roman Teimer, Kaloian Koynov, Sophie Willnow, Elmar Weinhold and Mark Helm 
264 1 |c 2011 
300 |a 10 
336 |a Text  |b txt  |2 rdacontent 
337 |a Computermedien  |b c  |2 rdamedia 
338 |a Online-Ressource  |b cr  |2 rdacarrier 
500 |a First published online: 30 October 2010 
500 |a Gesehen am 08.09.2022 
520 |a This work identifies the combination of enzymatic transfer and click labeling as an efficient method for the site-specific tagging of RNA molecules for biophysical studies. A double-activated analog of the ubiquitous co-substrate S -adenosyl- l -methionine was employed to enzymatically transfer a five carbon chain containing a terminal alkynyl moiety onto RNA. The tRNA:methyltransferase Trm1 transferred the extended alkynyl moiety to its natural target, the N2 of guanosine 26 in tRNA Phe . LC/MS and LC/MS/MS techniques were used to detect and characterize the modified nucleoside as well as its cycloaddition product with a fluorescent azide. The latter resulted from a labeling reaction via Cu(I)-catalyzed azide-alkyne 1,3-cycloaddition click chemistry, producing site-specifically labeled RNA whose suitability for single molecule fluorescence experiments was verified in fluorescence correlation spectroscopy experiments. 
700 1 |a Burhenne, Jürgen  |d 1963-  |e VerfasserIn  |0 (DE-588)1034228889  |0 (DE-627)745126987  |0 (DE-576)381858197  |4 aut 
700 1 |a Teimer, Roman  |e VerfasserIn  |0 (DE-588)1133386091  |0 (DE-627)889244219  |0 (DE-576)489428193  |4 aut 
700 1 |a Koynov, Kaloian  |e VerfasserIn  |4 aut 
700 1 |a Willnow, Sophie  |e VerfasserIn  |4 aut 
700 1 |a Weinhold, Elmar  |e VerfasserIn  |4 aut 
700 1 |a Helm, Mark  |d 1969-  |e VerfasserIn  |0 (DE-588)132228076  |0 (DE-627)519546229  |0 (DE-576)25150431X  |4 aut 
773 0 8 |i Enthalten in  |t Nucleic acids research  |d Oxford : Oxford Univ. Press, 1974  |g 39(2011), 5, Seite 1943-1952  |h Online-Ressource  |w (DE-627)26813250X  |w (DE-600)1472175-2  |w (DE-576)07760878X  |x 1362-4962  |7 nnas  |a Expanding the chemical scope of RNA methyltransferases to site-specific alkynylation of RNA for click labeling 
773 1 8 |g volume:39  |g year:2011  |g number:5  |g pages:1943-1952  |g extent:10  |a Expanding the chemical scope of RNA methyltransferases to site-specific alkynylation of RNA for click labeling 
856 4 0 |u https://doi.org/10.1093/nar/gkq825  |x Verlag  |x Resolving-System  |z lizenzpflichtig  |3 Volltext 
951 |a AR 
992 |a 20220908 
993 |a Article 
994 |a 2011 
998 |g 1133386091  |a Teimer, Roman  |m 1133386091:Teimer, Roman  |p 3 
998 |g 1034228889  |a Burhenne, Jürgen  |m 1034228889:Burhenne, Jürgen  |d 910000  |d 910100  |e 910000PB1034228889  |e 910100PB1034228889  |k 0/910000/  |k 1/910000/910100/  |p 2 
999 |a KXP-PPN1816299421  |e 4185856989 
BIB |a Y 
SER |a journal 
JSO |a {"id":{"eki":["1816299421"],"doi":["10.1093/nar/gkq825"]},"origin":[{"dateIssuedDisp":"2011","dateIssuedKey":"2011"}],"name":{"displayForm":["Yuri Motorin, Jürgen Burhenne, Roman Teimer, Kaloian Koynov, Sophie Willnow, Elmar Weinhold and Mark Helm"]},"relHost":[{"title":[{"title_sort":"Nucleic acids research","title":"Nucleic acids research"}],"pubHistory":["1.1974 -"],"part":{"issue":"5","pages":"1943-1952","year":"2011","extent":"10","text":"39(2011), 5, Seite 1943-1952","volume":"39"},"titleAlt":[{"title":"NAR online"},{"title":"NAR"},{"title":"Database issue"},{"title":"Web server issue"}],"disp":"Expanding the chemical scope of RNA methyltransferases to site-specific alkynylation of RNA for click labelingNucleic acids research","note":["Gesehen am 15.09.2025","Ungezählte Beil.: Database issue; Web server issue"],"type":{"bibl":"periodical","media":"Online-Ressource"},"recId":"26813250X","language":["eng"],"origin":[{"dateIssuedDisp":"1974-","publisher":"Oxford Univ. Press","dateIssuedKey":"1974","publisherPlace":"Oxford"}],"id":{"zdb":["1472175-2"],"eki":["26813250X"],"issn":["1362-4962"]},"physDesc":[{"extent":"Online-Ressource"}]}],"physDesc":[{"extent":"10 S."}],"title":[{"title_sort":"Expanding the chemical scope of RNA","subtitle":"methyltransferases to site-specific alkynylation of RNA for click labeling","title":"Expanding the chemical scope of RNA"}],"person":[{"family":"Motorin","given":"Yuri","display":"Motorin, Yuri","roleDisplay":"VerfasserIn","role":"aut"},{"given":"Jürgen","family":"Burhenne","role":"aut","display":"Burhenne, Jürgen","roleDisplay":"VerfasserIn"},{"given":"Roman","family":"Teimer","role":"aut","display":"Teimer, Roman","roleDisplay":"VerfasserIn"},{"given":"Kaloian","family":"Koynov","role":"aut","roleDisplay":"VerfasserIn","display":"Koynov, Kaloian"},{"given":"Sophie","family":"Willnow","role":"aut","display":"Willnow, Sophie","roleDisplay":"VerfasserIn"},{"given":"Elmar","family":"Weinhold","role":"aut","roleDisplay":"VerfasserIn","display":"Weinhold, Elmar"},{"role":"aut","display":"Helm, Mark","roleDisplay":"VerfasserIn","given":"Mark","family":"Helm"}],"recId":"1816299421","language":["eng"],"note":["First published online: 30 October 2010","Gesehen am 08.09.2022"],"type":{"bibl":"article-journal","media":"Online-Ressource"}} 
SRT |a MOTORINYUREXPANDINGT2011