Multiplex 3D nanoscopy resolves nanoarchitecture of human immunodeficiency virus

Resolving the nanoscale organization of viral and host proteins is important to understanding virion assembly and infectivity. Here, we present a robust framework for multiplexed optical 3D super-resolution microscopy of human immunodeficiency virus type 1 (HIV-1) particles using minimal fluorescenc...

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Hauptverfasser: Hacke, Moritz (VerfasserIn) , Kaplan, Charlotte (VerfasserIn) , Laketa, Vibor (VerfasserIn) , Heilemann, Mike (VerfasserIn) , Müller, Barbara (VerfasserIn) , Kräusslich, Hans-Georg (VerfasserIn)
Dokumenttyp: Article (Journal)
Sprache:Englisch
Veröffentlicht: 20 January 2026
In: ACS nano
Year: 2026, Jahrgang: 20, Heft: 2, Pages: 1911-1927
ISSN:1936-086X
DOI:10.1021/acsnano.5c12222
Online-Zugang:Verlag, lizenzpflichtig, Volltext: https://doi.org/10.1021/acsnano.5c12222
Volltext
Verfasserangaben:Moritz Hacke, Charlotte Kaplan, Vibor Laketa, Mike Heilemann, Barbara Müller, and Hans-Georg Kräusslich

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520 |a Resolving the nanoscale organization of viral and host proteins is important to understanding virion assembly and infectivity. Here, we present a robust framework for multiplexed optical 3D super-resolution microscopy of human immunodeficiency virus type 1 (HIV-1) particles using minimal fluorescence photon flux (MINFLUX) nanoscopy and DNA point accumulation for imaging in nanoscale topography (DNA-PAINT), achieving isotropic localization precision below 10 nm for five target proteins. First, we assessed linkage errors introduced by different labeling strategies by employing the HIV-1 matrix layer as a reference structure. We then extended the approach to display five viral and host proteins and mapped the spatial organization of tetraspanin proteins CD9 and CD81 in single virus-like particles. For accurate visualization and quantitation of multicolor 3D MINFLUX imaging data, we developed the analysis workflow and software matFLUX. The approach presented here enables high-resolution spatial mapping of protein components within individual virus particles and is generally applicable to the study of nanoscale architectures in 3D. 
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