De novo genome assembly of Ansell's mole-rat (Fukomys anselli)
Ansell's mole-rat (Fukomys anselli) is an African rodent known for its subterranean lifestyle and unique phenotypic traits, including extreme longevity, magnetoreception, and a cooperative breeding social structure. Efforts to dissect the genetic architecture of these traits and to decipher the...
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| Hauptverfasser: | , , , , , , , , |
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| Dokumenttyp: | Article (Journal) |
| Sprache: | Englisch |
| Veröffentlicht: |
January 2026
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| In: |
G3: Genes, genomes, genetics
Year: 2026, Jahrgang: 16, Heft: 1, Pages: 1-9 |
| ISSN: | 2160-1836 |
| DOI: | 10.1093/g3journal/jkaf271 |
| Online-Zugang: | Verlag, kostenfrei, Volltext: https://doi.org/10.1093/g3journal/jkaf271
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| Verfasserangaben: | Milica Bekavac, Raphael Coimbra, Veronica F. Busa, Mikaela Behm, Rebecca E. Wagner, Angela Goncalves, Sabine Begall, Michaela Frye, Duncan T. Odom |
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| 245 | 1 | 0 | |a De novo genome assembly of Ansell's mole-rat (Fukomys anselli) |c Milica Bekavac, Raphael Coimbra, Veronica F. Busa, Mikaela Behm, Rebecca E. Wagner, Angela Goncalves, Sabine Begall, Michaela Frye, Duncan T. Odom |
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| 520 | |a Ansell's mole-rat (Fukomys anselli) is an African rodent known for its subterranean lifestyle and unique phenotypic traits, including extreme longevity, magnetoreception, and a cooperative breeding social structure. Efforts to dissect the genetic architecture of these traits and to decipher their phylogenetic relationships within the broader African mole-rat family would greatly benefit from a reference-grade genome. Here, we report a first genome assembly of a male Ansell's mole-rat. By combining Oxford Nanopore Technologies long reads and Illumina short reads with Hi-C data, we generated a chromosome level assembly with a total length of 2.27 Gb, 412 scaffolds, and a scaffold N50 of 72.4 Mb. We identified 99.54% of expected genes and annotated 29,094 transcripts using RNA sequencing data. This high-quality de novo genome of F. anselli lays the foundation for dissecting the genetic and evolutionary basis of its extraordinary traits and resolving African mole-rat phylogeny. | ||
| 700 | 1 | |a Coimbra, Raphael |e VerfasserIn |4 aut | |
| 700 | 1 | |a Busa, Veronica F |e VerfasserIn |4 aut | |
| 700 | 1 | |a Behm, Mikaela |e VerfasserIn |4 aut | |
| 700 | 1 | |a Wagner, Rebecca E. |d 1995- |e VerfasserIn |0 (DE-588)1251445470 |0 (DE-627)178910419X |4 aut | |
| 700 | 1 | |a Goncalves, Angela |e VerfasserIn |4 aut | |
| 700 | 1 | |a Begall, Sabine |e VerfasserIn |4 aut | |
| 700 | 1 | |a Frye, Michaela |e VerfasserIn |4 aut | |
| 700 | 1 | |a Odom, Duncan T |e VerfasserIn |4 aut | |
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