The inceptionist’s guide to base editing: de novo PAM generation to reach initially inaccessible target-sites

Base editing by CRISPR crucially depends on the presence of a PAM in proper distance to the editing-site. Here we present and validate an efficient one-shot approach termed “inception”, relaxing these constraints. This is achieved by sequential, combinatorial base editing: de novo generated synonymo...

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Hauptverfasser: Pakari, Kaisa (VerfasserIn) , Wittbrodt, Joachim (VerfasserIn) , Thumberger, Thomas (VerfasserIn)
Dokumenttyp: Article (Journal) Kapitel/Artikel
Sprache:Englisch
Veröffentlicht: July 07, 2022
In: bioRxiv beta
Year: 2022, Pages: 1-18
DOI:10.1101/2022.07.07.499158
Online-Zugang:Verlag, kostenfrei, Volltext: https://doi.org/10.1101/2022.07.07.499158
Verlag, kostenfrei, Volltext: https://www.biorxiv.org/content/10.1101/2022.07.07.499158v1
Volltext
Verfasserangaben:Kaisa Pakari, Joachim Wittbrodt, Thomas Thumberger
Beschreibung
Zusammenfassung:Base editing by CRISPR crucially depends on the presence of a PAM in proper distance to the editing-site. Here we present and validate an efficient one-shot approach termed “inception”, relaxing these constraints. This is achieved by sequential, combinatorial base editing: de novo generated synonymous, non-synonymous or intronic PAM-sites facilitate subsequent base editing at nucleotide positions inaccessible before, increasing the targeting range of highly precise editing approaches.
Beschreibung:Gesehen am 26.02.2024
Beschreibung:Online Resource
DOI:10.1101/2022.07.07.499158